[TRANSLATION_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [MODIFY] OVERWRITE_DB = 1 TRUNCATE_GENE_TABLES = 1 TRUNCATE_SEQUENCE_TABLES = 1 [FILES] SCAFFOLD = [ fa http://download.lepbase.org/v4/provider/Heliconius_besckei.fasta.gz ] ; GFF = ; CONTIG = ; PROTEIN = [GENE_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [GFF] CONDITION10 = [ EXPECTATION transcript hasParent gene force ] CONDITION1 = [ MULTILINE CDS ] CONDITION6 = [ EXPECTATION exon hasParent transcript|mrna|trna|ncrna force ] CONDITION2 = [ MULTILINE cDNA_match ] SORT = 1 CONDITION11 = [ EXPECTATION cds|exon|mrna|transcript|trna|ncrna|gene <=[_start,_end] SELF warn ] CONDITION5 = [ EXPECTATION cds hasParent mrna force ] CONDITION9 = [ EXPECTATION trna hasParent gene force ] CONDITION8 = [ EXPECTATION ncrna hasParent gene force ] CHUNK = [ change region ] CONDITION4 = [ EXPECTATION cds hasSister exon force ] CONDITION3 = [ MULTILINE match ] CONDITION7 = [ EXPECTATION mrna hasParent gene force ] [META] ASSEMBLY.ACCESSION = SPECIES.PRODUCTION_NAME = Heliconius_besckei_helico3 PROVIDER.NAME = Heliconius Genome Sequencing Consortium SPECIES.TAXONOMY_ID = 33420 GENEBUILD.START_DATE = 116-11 ASSEMBLY.DEFAULT = helico3 ASSEMBLY.DATE = 2016-08-03 GENEBUILD.VERSION = 1 SPECIES.SCIENTIFIC_NAME = Heliconius besckei GENEBUILD.METHOD = import ASSEMBLY.NAME = helico3 SPECIES.DISPLAY_NAME = Heliconius besckei GENEBUILD.ID = 1 PROVIDER.URL = http://mallet.oeb.harvard.edu SPECIES.DIVISION = EnsemblMetazoa SPECIES.URL = Heliconius_besckei_helico3 SPECIES.ALIAS = SPECIES.BIOPROJECT = SPECIES.COMMON_NAME = [TRANSCRIPT_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ]