[TRANSLATION_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [MODIFY] TRUNCATE_SEQUENCE_TABLES = 1 OVERWRITE_DB = 1 TRUNCATE_GENE_TABLES = 1 [FILES] ; PROTEIN = ; CONTIG = ; GFF = SCAFFOLD = [ fa http://download.lepbase.org/v4/provider/Heliconius_cydno.fasta.gz ] [GENE_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [GFF] CHUNK = [ change region ] CONDITION3 = [ MULTILINE match ] CONDITION4 = [ EXPECTATION cds hasSister exon force ] CONDITION7 = [ EXPECTATION mrna hasParent gene force ] CONDITION9 = [ EXPECTATION trna hasParent gene force ] CONDITION8 = [ EXPECTATION ncrna hasParent gene force ] CONDITION6 = [ EXPECTATION exon hasParent transcript|mrna|trna|ncrna force ] CONDITION2 = [ MULTILINE cDNA_match ] CONDITION11 = [ EXPECTATION cds|exon|mrna|transcript|trna|ncrna|gene <=[_start,_end] SELF warn ] SORT = 1 CONDITION5 = [ EXPECTATION cds hasParent mrna force ] CONDITION10 = [ EXPECTATION transcript hasParent gene force ] CONDITION1 = [ MULTILINE CDS ] [META] ASSEMBLY.NAME = helico3 GENEBUILD.METHOD = import GENEBUILD.ID = 1 SPECIES.DISPLAY_NAME = Heliconius cydno GENEBUILD.VERSION = 1 ASSEMBLY.DATE = 2016-08-03 SPECIES.SCIENTIFIC_NAME = Heliconius cydno PROVIDER.NAME = Heliconius Genome Sequencing Consortium SPECIES.TAXONOMY_ID = 33424 GENEBUILD.START_DATE = 116-11 ASSEMBLY.DEFAULT = helico3 SPECIES.PRODUCTION_NAME = Heliconius_cydno_helico3 ASSEMBLY.ACCESSION = SPECIES.BIOPROJECT = SPECIES.COMMON_NAME = SPECIES.ALIAS = SPECIES.URL = Heliconius_cydno_helico3 PROVIDER.URL = http://mallet.oeb.harvard.edu SPECIES.DIVISION = EnsemblMetazoa [TRANSCRIPT_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ]